Dead.

It all happened so fast. One minute they were there, and the next she was standing in their ashes.

Lost forever.

It wasn't fair. They’d devoted their entire lives to defending Equestria, and what was their reward? To be cut down in the blink of an eye. Weren't they supposed to be the heroes? Weren't they the good guys, the chosen ones, the saviors of the land? This wasn’t the way things were supposed to go!

Alone.

Twilight wouldn't accept it. No, she couldn't accept it. How could fate be so cruel? Why did she have to be the only one left alive? Why did she have to suffer on with such a terrible burden, reliving that terrible moment again and again for all eternity? No, regardless of what anyone said or did, she knew that a terrible mistake had been made, and she would see it fixed...

...no matter what the cost.

MLP/Shadow of the Colossus crossover.

Picture by Companda.

Like a stallion terrified of having children, they pulled me out of retirement. I was the best Special Agent they had, which was saying a lot, because I'm about as effective at my job as a mime having a stroke, and only half as hilarious. But I've been called upon to serve my nation again, and like the gift of surprise fellatio, I am bound to serve my nation well, and hopefully without any of the implied sexual humiliation. So I gotta buckle up and prepare for survivor's guilt, just like the time I had to go up against those racially-biased SAT questions involving graphic violence, adult language, and some sexual content.
When you're in a noir situation like mine, you could only think in metaphors and similes.

Sunbeam Sparkle is not a good pony. She might not be pure evil, but she is ruthless, ambitious, and so power-hungry that she would even aspire to usurp Celestia's throne. Worse, she succeeds in manipulating Celestia into not only surrendering rule over Equestria, but her immortality as well.

It is often said that power corrupts, and absolute power corrupts absolutely. In most cases that’s true. Many good ponies have begun with good intentions, but slowly lost their way. However, this is not always the case. A rare few virtuous ponies have the character and strength of will to resist temptation, and are never corrupted by their authority.

Even rarer, there comes a time when gaining power makes a pony better than they were before. This is one such story.

This story is a sequel to Without a Hive

It is a time of change for Equestria. A small but slowly growing number of changelings have made the kingdom their home, living openly with ponies. Many ponies welcome them in friendship. Others are concerned by the strange and unusual creatures that disrupt the traditional life of Equestria. Yet others worry that such open acceptance leaves Equestria vulnerable to less well-intentioned changelings. And some still fear the insectoid creatures, memories of invasions--and more personal attacks--still strong in their minds.

Sky, Nictis, and all the other changelings of Equestria would love nothing more than to live in peace, but such changes rarely come easily. But in proper changeling fashion, they are determined to endure, and this time they are not alone. Instead of the shelter of disguises and lies, they are strengthened by the friendship of the ponies that accept them, ready to stand tall in the face of an uncertain future.

For nobody, from the new Equestrian changelings to the Princesses themselves, knows how Queen Chrysalis is going to respond...

Book cover art by viwrastupr

"We live in what we believe is a shell, a closed sphere where all is constant. As physics would have it, nothing in the universe is unique, nothing is wasted or destroyed: it is repurposed. But now I prove them wrong. With a single idea, I realize that we are not so insignificant as we think. We are not slaves to destiny and existence. We are the ashes of gods, the fruits of eternity, the products of choice and fate. We are not meaningless. This universe is not our prison.

This is our empire."

- Excerpt from A Lexicon of Impossibilities, by Cypher

Special thanks:
AeronJVL, for the amazing cover art.
Emberspeak, Forderz, RTStephens, PropMaster, and RazgrizS57 for their editing.
shortskirtsandexplosions for the idea.

A dalek appears in Equestria - not just any dalek, but the one that had been corrupted by Rose Tyler's DNA. It has a choice of life as a pony, or dying, and finds that it cannot bear to die a second time. Thus begins a strange adventure as the dalek tries to find a place for itself in a world that is completely antithetical to its former existence and way of thinking...

...and why does that earth pony stallion look familiar...?

The newly coronated Princess Twilight suffers an abrupt tragedy. Having lost two loved ones, she begins to question her own mortality, and that of her friends.

AJ, Dash, Rarity, Pinkie, Fluttershy. . . they are just the beginning. Twilight will live for thousands of years, so every pony she cares about—every pony she will ever care about, will die.

She could barely handle the pain of one funeral, let alone the thought of hundreds of them. Twilight finds a clever way to ensure all of her friends never die. They can’t all be ageless alicorns, but they can all move into Twilight’s Dollhouse. Then they can be best friends forever.

Sequel: Twilight's Dollhouse 2
Fanmade Song: Twilight's Dollhouse

Source: Dreampaw
Editor: Gage of Grandiloquence, Breath of Plagues
Pre-read & Idea pony: TypeWriterError,
v1.1 Revised chapters 1-10 on May 1st 2013
--Pending a few more revisions, including ch. 14
Now on TV Tropes.

Supervillains are always hunting for mystical ancient artifacts. I can back that up--I worked for one.

Emphasis on "worked." We were probing yet another long-abandoned underground city when my employer finally found the fabled Sphere of Meganacus...only to find it wasn't exactly friendly to humans. Now my boss, my best friend, and my worst enemy are all tiny sentient horses. Yes, I really just said that.

Did I mention they're a lot younger, now, too? God, I need a drink. I hate babysitting operations.

Set in the same universe as "Someone Came With Her."

It was a completely normal day in Ponyville for Twilight Sparkle, or at least, that's what she thought it would be. That should have been her first clue that something was up. She expected it to be a quiet day where she could hang out with her friends, and maybe she'd get a friendship letter in if she was lucky.

She did not, however, expect everypony in town to turn into a flaming racist overnight.

Find this story and more in a print copy! Just click these words here!

Good morning, afternoon, night, or whenever you're reading this. My name is Edward, aka 'patient 42', and I am currently residing in an insane asylum.
Why?
I suppose it all started When the ruler of this place called Equestria tasked her personal student, Twilight Sparkle, to travel to Earth and study the human race.
Unfortunately for Twilight, when she teleported to our world she, well... she appeared in the middle of the road. Right in front of my car. Needless to say, this put a pretty big dent in her expedition. ...as well as my car's bumper.

Sounds crazy, right? But hey, maybe thats the reason why I'm in this cell.
Point is, The story I'm about to tell you is the tale of events sparked by that ill-fated night.

note: In this plane of existence, the franchise "My Little Pony" does not exist. In short; this is not, nor will it ever be, a 'brony meets pony' story.
Also, on a more recent note, I had this idea and began writing way back in S2, so this is in no way inspired by EqG. (also, its non-alicorn twilight)