After failing to stop Nightmare Moon in the ancient castle of the pony sisters, Twilight Sparkle is left with a scar that will permanently change the rest of her natural born life. As Twilight recovers from her ordeal, she finds that she is left with a difficult choice. Either live her life as a lie or sacrifice her innocence to protect the ones she loves. The path before her is set and she must now walk it alone. The sands of time continues ever onward, with everyone already trapped in its muddy depths. The sun will rise and the sun will fall. Waiting for its call, Death awaits for all.

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Art created by:
http://cuteskitty.deviantart.com (top)
http://ventious.deviantart.com (bottom)

I just put the two together

[If anyone wants to continue or re-make this story, feel free. Copy it all or change it]

An unorthodox Jedi is found outside of PonyVille one week after crashing into Equestria. The Jedi is in exile and is hiding from the rest of the Galaxy. The only thing on his mind is how to remain hidden and to search for the truth about the Force. With a sarcastic wit and ponies to deal with, he attempts to live out his days in Equestria.

There's been another sighting of the mysterious Mare Do Well...but this time, all of Rainbow Dash's friends plead ignorance, insisting that they've put aside their costumes for good. Rainbow Dash is determined to uncover the masked mare's true identity before she's humiliated yet again, but this time around, the vigilante seems especially interested in her as well. Will Rainbow Dash be able to solve the mystery before the culprit takes the hoax too far? Or is she in danger of losing not only her mind, but her heart?

Featured on Equestria Daily.

Naruto's life has been taken and is given a second chance at life due to certain circumstances. However, what he didn't realize is that he would be living in a world of ponies and magic, not in his own world. Will Naruto learn to put his past life behind and accept this strange new world as his home? Or will he reject it outright and find a way back to Konoha?

Rated T for Blood, Violence, and Language.

Image is from a user named VertreV from Deviantart. Give 'em a round of applause!

A pony can choose to do many things in his or her life before he or she dies: he could be a farmer, bringing in produce and commerce to the kingdom, or she could be a rebel, fighting to further her cause. Death visits everypony, however: the farmer hopes to leave his farm in capable hooves before he passes, and the rebel hopes to have finished the fight for whatever cause she was fighting for before her time comes.

Sometimes, death likes to come calling early: the farmer taken before his prime provides no additional produce; and the rebel becomes a martyr, causing others to fight in her place.

Sometimes, rather than kill a pony, it is better to leave him or her broken.

After surviving the dreaded Order 66, Jedi knight Joseph Malek has a near-death experience, in which he visits the most powerful being in existence. The strange being tells him of a future visit to its world before sending him back to his own existence. Twenty years later, while on a mission for the Rebellion, Malek accidentally stumbles upon a secret new world when his ship is damaged. The world’s Ruler, Princess Celestia, welcomes him and offers to aid in his ship's repairs. While there, Malek averts disaster when he stops a mutiny with the help of the planet’s inhabitants.

Now he must keep the world’s existence a secret when he travels back to his own dimension, which is rather hard when one if its people decides to sneak back with him.

(edited by Flutterguy_6996. thanks for the help.)
(note: long periods between updates. sorry.)

Applejack wakes up the morning after her birthday party with a killer hangover, wings and a horn. She has no recollection of the night before, and no idea how to deal with her new found appendages and abilities. This simple apple farmer from Ponyville will have to learn to tame them or risk losing those which she holds most dear.

During their showdown with Nightmare, the 6 elements of harmony fail to defeat the dreaded corrupt Nightmare Moon and are soon confronted by a grim fate. However Twilight Sparkle uses her last essence of magic to save her friends, and faces the Lunar Queen who then decides upon a much cruler fate than death. Born as a pony of a stolen life, Starswirl the daughter of Nightmare Moon and Twilight is born. However there is more to see in Starswirl than meets one's eyes.

Please do not judge from the description, I made sure that there's no grim tale about the fic, and I keep in mind everyone's opinions. Also i have moved this from FF.net, so updates will be rather slow.

Twilight studies magic again with Princess Celestia. As she studies, Twilight stumbled upon an interesting scroll in the Princess’s archives. Trouble arises in Ponyville before the Princess can explain. After Ponyville is situated once again, more mysteries confront Twilight about the scrolls she found. Celestia is now faced with how to explain to her student its history without causing her to lose faith.

Rainbow dash gets the surprise of her life when she finds out Gilda and Pinkie pie are engaged, but even more surprising is how excited everypony else is for the upcoming ceremony. Can Rainbow dash learn to cope with her jealousy and be the best mare her friend deserves? Can Gilda deal with all these crazy ponies without snapping? Can Spike find anyone to date him? Oh the delightful melodrama! The first time Ive ever written a fic. I'm gonna need lots of feedback on this one. (Please be gentle?)

Image thanks to Fim wiki for the background and on DA- Takua770 for the Rainbow dash image, and generalzoi's pony creator for pinkie pie and her base dress.